Package: CRTspat 1.4.0

CRTspat: Workflow for Cluster Randomised Trials with Spillover

Design, workflow and statistical analysis of Cluster Randomised Trials of (health) interventions where there may be spillover between the arms (see <https://thomasasmith.github.io/index.html>).

Authors:Thomas Smith [aut, cre, cph], Lea Multerer [ctb], Mariah Silkey [ctb]

CRTspat_1.4.0.tar.gz
CRTspat_1.4.0.zip(r-4.7-any)CRTspat_1.4.0.zip(r-4.6-any)CRTspat_1.4.0.zip(r-4.5-any)
CRTspat_1.4.0.tgz(r-4.6-any)CRTspat_1.4.0.tgz(r-4.5-any)
CRTspat_1.4.0.tar.gz(r-4.7-any)CRTspat_1.4.0.tar.gz(r-4.6-any)
CRTspat_1.4.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
CRTspat/json (API)

# Install 'CRTspat' in R:
install.packages('CRTspat', repos = c('https://thomasasmith.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/thomasasmith/crtspat/issues

On CRAN:

Conda:

5.85 score 5 stars 40 scripts 300 downloads 15 exports 90 dependencies

Last updated from:22478b3cd1. Checks:6 WARNING, 2 OK, 1 ERROR. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develWARNING243
source / vignettesOK310
linux-releaseWARNING230
macos-releaseWARNING429
macos-oldrelERROR209
windows-develWARNING159
windows-releaseWARNING149
windows-oldrelWARNING161
wasm-releaseOK187

Exports:aggregateCRTanonymize_sitecompute_distancecompute_meshCRTanalysisCRTpowerCRTspCRTwritelatlong_as_xyplotCRTrandomizeCRTreaddatasimulateCRTspecify_bufferspecify_clusters

Dependencies:abindbackportsBHbootcallrcheckmateclassclassIntclicodetoolscpp11DBIdeldirdescdistributionaldplyre1071farverforeachgeegenericsggplot2gluegridExtragtableinlineisobanditeratorsKernSmoothlabelinglatticelifecyclelme4loomagrittrMASSMatrixmatrixStatsminqanlmenloptrnumDerivOORotelpillarpkgbuildpkgconfigpolyclipposteriorprocessxproxypspurrrQuickJSRR6rbibutilsRColorBrewerRcppRcppEigenRcppParallelRdpackreformulasrlangrstans2S7scalessfspspatstat.dataspatstat.geomspatstat.randomspatstat.sparsespatstat.univarspatstat.utilsStanHeadersstringistringrtensortensorAtibbletidyrtidyselectTSPunitsutf8vctrsviridisLitewithrwk

Use Case 04: Estimation of optimal cluster size for a trial with pre-determined buffer width
Conclusions
Rendered fromUsecase4.Rmdusingknitr::rmarkdown

Last update: 2026-01-20
Started: 2023-03-21

Use Case 05: Analysis of trials (including methods for analysing spillover)
Statistical Methods | Assessing model fit | Spillover | Models that do not consider spillover | Spillover as a function of distance | Spillover as a function of surround | Geostatistical models and mapping results
Rendered fromUsecase5.Rmdusingknitr::rmarkdown

Last update: 2026-01-20
Started: 2023-03-29

Use Case 06: Thematic mapping of the geography of a CRT
Conclusions
Rendered fromUsecase6.Rmdusingknitr::rmarkdown

Last update: 2026-01-20
Started: 2023-04-02

Use Case 10: Power sample size and bias calculations using a diffusion model for spillover
Rendered fromUsecase10.Rmdusingknitr::rmarkdown

Last update: 2026-01-20
Started: 2026-01-20

Use Case 08: Eggs - to fry or scramble?
Analysis
Rendered fromUsecase8.Rmdusingknitr::rmarkdown

Last update: 2025-01-30
Started: 2023-05-14

Use Case 07: Power and sample size calculations allowing for spillover
Analysis by simulated true efficacy | Analysis by simulated spillover interval
Rendered fromUsecase7.Rmdusingknitr::rmarkdown

Last update: 2025-01-26
Started: 2023-03-29

Use Case 09: Preparation of datasets for CRTspat
Rendered fromUsecase9.Rmdusingknitr::rmarkdown

Last update: 2023-10-15
Started: 2023-04-02